CAP5937 - Bioinformatics

Fall 2004
MW 4:30pm to 5:45pm
Prof. Amar Mukherjee

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Introduction to Molecular Biology (pdf)

Sequence Similarity (complete) (pdf)

Multiple Alignment (pdf)

Mapping and Sequencing (pdf slides)

Guest Lecture by Dr. Chris Parkinson (pdf) (power point)

Gel electrophoresis, recombinant DNA, PCR (pdf)

Introduction to Microarrays (pdf)

Pattern Matching and Suffix Trees (ppt) (pdf)

Search and Sequence analysis Tools (pdf)

Phylogenetic Trees (pdf slides)

Phylogenetic Trees - Dr. Tandy Warnow's Tutorial (pdf slides)

Phylogenetic Trees - Dr. Tandy Warnows's Lecture in Harvard (pdf slides)

Applications of Suffix Trees (11/15/04) (ppt slides) (pdf slides)

Longest common subsequence (11/15/04) (ppt slides) (pdf slides)

Computational Approaches to Haplotype Inference(11/22/04) (ppt slides) (pdf slides)

Hidden Markov Model Alignment (12/1/04) (ppt slides) (pdf slides)

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Last Modified Dec.1, 2004